BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C10SP1|AL427741
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig638 1031 0.0
>3x_Contig638
Length = 2044
Score = 1031 bits (520), Expect = 0.0
Identities = 539/546 (98%)
Strand = Plus / Plus
Query: 452 actgccactctgaaattaatctatcgattttattcaacactagtattggtttcaacttct 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 actgccactctgaaattaatctatcgattttattcaacactagtattggtttcaacttct 97
Query: 512 caatccagcattgacgtaagacagtgaccgtttgggaacacacaccttccactacatcta 571
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 98 caatccagcattgacgtaagacattttttttttgggaacacacaccttccactacatcta 157
Query: 572 ccaaaacaacagcaccatcacacaaacgcgatgcagcactgacttcacttgaaaaatcaa 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ccaaaacaacagcaccatcacacaaacgcgatgcagcactgacttcacttgaaaaatcaa 217
Query: 632 tgtgacctggagagtcgattaaattaatcaaatgttcgttcaccagtggttcatctgaac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgtgacctggagagtcgattaaattaatcaaatgttcgttcaccagtggttcatctgaac 277
Query: 692 tttcttgcttgtgcagtactctgaaatataaagaaatggcacttgattccatggtaatac 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttcttgcttgtgcagtactctgaaatataaagaaatggcacttgattccatggtaatac 337
Query: 752 ctcttagctgttcatcaggtcgtgagtctaggtatctaactctccctgctagtttctgag 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctcttagctgttcatcaggtcgtgagtctaggtatctaactctccctgctagtttctgag 397
Query: 812 atatgatgccgttagatgctaaaagggagtctgacaacgatgtcttaccatgatcaacat 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atatgatgccgttagatgctaaaagggagtctgacaacgatgtcttaccatgatcaacat 457
Query: 872 gtgctaaaatgcaaatatttctaatgcatgaagggtcggcctgtagccgttttgatgttt 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgctaaaatgcaaatatttctaatgcatgaagggtcggcctgtagccgttttgatgttt 517
Query: 932 ctggacctgcgcgagacatggtgcaattctttcaattcgagtttcaatgcttcagggstt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 518 ctggacctgcgcgagacatggtgcaattctttcaattcgagtttcaatgcttcagggctt 577
Query: 992 gaagtc 997
||||||
Sbjct: 578 gaagtc 583
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7872
Number of Sequences: 1807
Number of extensions: 7872
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)